| Event | Time | Date | Name | Meet | History |
|---|---|---|---|---|---|
| 50 Free | 18.87 | Jan. 1, 2007 | Ben Wildman-Tobriner | - | |
| 100 Free | 41.09 | March 26, 2022 | Andrei Minakov | NCAA Division I Mens Championship | |
| 200 Free | 1:31.49 | March 23, 2022 | Andrei Minakov | NCAA Division I Mens Championship | |
| 500 Free | 4:10.02 | March 22, 2018 | Grant Shoults | NCAA Division I Mens Championships | |
| 1000 Free | 8:46.79 | Feb. 19, 2022 | Grant Shoults | Stanford vs. California | |
| 1650 Free | 14:24.35 | March 24, 2012 | Chad LA TOURETTE | NCAA Division I Mens Championships | |
| 50 Back | 20.93 | March 23, 2022 | Leon MacAlister | NCAA Division I Mens Championship | |
| 100 Back | 44.75 | March 4, 2022 | Leon MacAlister | Pacific 12 Championships (M) | |
| 200 Back | 1:38.95 | March 26, 2022 | Leon MacAlister | NCAA Division I Mens Championship | |
| 50 Breast | 25.01 | Nov. 8, 2018 | Matt Anderson | Stanford vs. Cal Triple Distance | |
| 100 Breast | 50.87 | March 29, 2024 | Ron Polonsky | NCAA Division I Mens Championships | |
| 200 Breast | 1:51.07 | March 3, 2021 | Daniel Roy | Pac-12 Men's Championships | |
| 50 Fly | 21.12 | Nov. 3, 2023 | Rafael Gu | Cal vs Stanford Triple Distance | |
| 100 Fly | 43.71 | March 25, 2022 | Andrei Minakov | NCAA Division I Mens Championship | |
| 200 Fly | 1:38.61 | Feb. 24, 2024 | Andrei Minakov | CAL @ Stanford Men | |
| 100 IM | 49.79 | Nov. 5, 2021 | Jonny Affeld | Triple Distance Meet | |
| 200 IM | 1:39.38 | March 26, 2015 | Dave Nolan | NCAA Division I Mens Championships | |
| 400 IM | 3:35.29 | March 23, 2018 | Abrahm Devine | NCAA Division I Mens Championships | |
| 200 Free Relay | 1:14.22 | March 26, 2009 | Dunford | NCAA Division I Mens Championships | |
| 400 Free Relay | 2:46.06 | March 30, 2024 | Minakov, Gu, Dupont, McFadden | NCAA Division I Mens Championships | |
| 800 Free Relay | 6:06.83 | March 23, 2022 | Minakov, Maurer, Polonsky, Forst | NCAA Division I Mens Championship | |
| 200 Medley Relay | 1:22.41 | March 23, 2022 | MacAlister, Polonsky, Minakov, Affeld | NCAA Division I Mens Championship | |
| 400 Medley Relay | 3:01.45 | March 4, 2022 | MacAlister, Polonsky, Minakov, Maurer | Pacific 12 Championships (M) |
